dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00013
Location and strand information: 12047 - 13357 (-)
Family: GH13_20|GH13
Protein type: CAZyme
Protein description: Neopullulanase
Protein isoelectric point: 5.3922
Protein molecular weight: 50340.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00014
Location and strand information: 13551 - 14975 (-)
Family: GT5
Protein type: CAZyme
Protein description: Glycogen synthase
Protein isoelectric point: 5.9448
Protein molecular weight: 53662.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00015
Location and strand information: 15046 - 16158 (-)
Family: null
Protein type: null
Protein description: Glycogen biosynthesis protein GlgD

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00016
Location and strand information: 16231 - 17445 (-)
Family: null
Protein type: null
Protein description: Glucose-1-phosphate adenylyltransferase

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00017
Location and strand information: 17459 - 19459 (-)
Family: GH13|CBM48|GH13_9
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 5.2249
Protein molecular weight: 76020.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00018
Location and strand information: 19926 - 20666 (+)
Family: MerR
Protein type: TF
Protein description: HTH-type transcriptional activator mta

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00019
Location and strand information: 20766 - 22007 (-)
Family: 9.A.40.2.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00020
Location and strand information: 22031 - 22954 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004116_1|CGC1
Gene ID: MGYG000004116_00021
Location and strand information: 22957 - 23862 (-)
Family: 3.A.11.1.1
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycogen download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004116_00013	Neopullulanase	CAZyme	12047	13357	-	GH13_20\| GH13
MGYG000004116_00014	Glycogen synthase	CAZyme	13551	14975	-	GT5
MGYG000004116_00015	Glycogen biosynthesis protein GlgD	null	15046	16158	-	NTP_transferase
MGYG000004116_00016	Glucose-1-phosphate adenylyltransferase	null	16231	17445	-	NTP_transferase
MGYG000004116_00017	1,4-alpha-glucan branching enzyme GlgB	CAZyme	17459	19459	-	GH13\| CBM48\| GH13_9
MGYG000004116_00018	HTH-type transcriptional activator mta	TF	19926	20666	+	MerR
MGYG000004116_00019	hypothetical protein	TC	20766	22007	-	9.A.40.2.4
MGYG000004116_00020	hypothetical protein	null	22031	22954	-	Mem_trans\| Mem_trans
MGYG000004116_00021	hypothetical protein	TC	22957	23862	-	3.A.11.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature